PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000705786
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 542aa    MW: 60917.1 Da    PI: 5.7672
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000705786genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.52.5e-23271563126
            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    + +rFhPt++e   ++L+kk+++++ ++  +++ +d+ k+ePw+Lp +++++   + k wy Fs  d k++++ r +r+tk g+Wk  g +++v  
  MDP0000705786  27 AAIRFHPTEDEKA-DFLRKKMKNHNSQACLFLPVIDVRKFEPWELPgRMFAEspyQXKAWYSFSWCDYKSNNSPRFKRKTKXGFWKMNGXQRDVGP 121
                    568********99.9**********999888***************542222455788************************************88 PP

            NAM  95 kkgelvglkktLvfy.....kgrapkgektdWvmhey 126
                      +  +  k+tL+f      +gr++k++ t+W mhey
  MDP0000705786 122 --KYFTCKKRTLTFKkktfqEGRRSKSVTTSWKMHEY 156
                    ..445566677777755555899************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.32E-2813185IPR003441NAC domain
PROSITE profilePS5100526.97825185IPR003441NAC domain
PfamPF023651.5E-1028156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    Send to blast
MKNFSSSSSS TSMXTTTTAQ SVPDMVAAIR FHPTEDEKAD FLRKKMKNHN SQACLFLPVI  60
DVRKFEPWEL PGRMFAESPY QXKAWYSFSW CDYKSNNSPR FKRKTKXGFW KMNGXQRDVG  120
PKYFTCKKRT LTFKKKTFQE GRRSKSVTTS WKMHEYIRIK PERGSSPHQA RDQQRGFVLC  180
VLKYKPVDXX XNKKKLKGTS ICGDFADSTG NRGYIASTSG ADEAATAAAT NHMSPDTEEV  240
LAYKQLEHDL LGSGNQDDGE PAGGSSSDFN QSLRDMIQEV WWQLCSPAGE DLNSLFPLPE  300
PPQPHQPPQL GNAPDVCSGE LVDPGTSGCI TYNTDNQAAT MNHMISDTEE XLAYKQLERD  360
VFAGGNHDVG ERGSGILTFG DGNDETGGWK FSDFDDQAAS DRFQELFXEM GEILNSSSQP  420
LQPHQPXQPH QPQEYSPSTL QQSLFPDNIS YPEYKNNIST NDPNEQVNKL ANGVPIXATD  480
ERISVEENSE YRFRAFGYAA EXHHLTRTDD SMHEYVDPAA RTTVSYQNLS RILQIXXILC  540
I*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-15131563138Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008359670.10.0PREDICTED: uncharacterized protein LOC103423344
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3863022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-15NAC domain containing protein 28